Publications & Presentation

• Xiang Li, Tao He, Jun Ni, Ge Wang, “P2P-enhanced Distributed Parallel Iterative Cone Beam CT Image Reconstruction,” Radiology Society of North America, the 90th Assembly and Annual Meeting (RSNA2004), Nov.28-Dec.3,2004, McCormick Place, Chicago, Illinois, USA
• Xiaoxu Han, James Cremer, Zhihong Wang, Jun Ni, “LZB, A Hybrid Algorithm of Local Ray-casting and Z-buffering for Large Geometric Datasets,” presented at the International Workshop on Visualization and Visual Steering (VVS'’04), in conjunction with GCC2004, Wu Han, China, Oct. 21-24, 2004 GCC2004, in Lecture Note in Computer Science (LNCS), Vol. 3252, pp 720-727, Springer-Verlag Heidelberg, Germany, 2004
• Zhang Y, Knosp BM, Maconochie M, Friedman RA, Smith RJ.A comparative study of Eya1 and Eya4 protein function and its implication in branchio-oto-renal syndrome and DFNA10. J Assoc Res Otolaryngol. 2004 Sep;5(3):295-304. Epub 2004 Jun 24. PMID: 15492887
• Logue MW, Park J, Ni J, Cremer J, Segre A, Knosp B, Beck S, Vieland V, Interactive visualization tools for genetic data, ASHG 54th Annual Meeting, American Society of Human Genetics, 2004. p 528.
• Juw Won Park, Mark Logue, Jun Ni, James Cremer, Alberto Segre, Veronica Vieland, “Scientific Visualization of Multidimensional Data: Genetic Likelihood Visualization,” accepted at High Performance Computing and Applications (HPCA2004), Shanghai, China, August 8-10, 2004, accepted and being published in Lecture Note in Computer Science (LNCS), Springer-Verlag Heidelberg, Germany, 2004
• Xiang Li, Jun Ni, Ge Wang, “Parallel Iterative CT Image Reconstruction on a Linux Cluster of Legacy Computers,” to High Performance Computing and Applications (HPCA2004), Shanghai, China, August 8-10, 2004, accepted and being published in Lecture Note in Computer Science (LNCS), Springer-Verlag Heidelberg, Germany, 2004
• Xiaoxu Han, Jun Ni, Zhihong Wang, Xiaoqian Jiang, “ P-LZB, A Real-Time Parallel Local Z-Buffer Rendering Algorithm of Large Geometric Datasets,” submitted to High Performance Computing and Applications (HPCA2004), Shanghai, China, August 8-10, 2004, , accepted and being published in Lecture Note in Computer Science (LNCS), Springer-Verlag Heidelberg, Germany, 2004
• Jun Ni, Ge Wang, Shaowen Wang, Tiange Zhuang, Weiqin Tong, “Grid-enhanced International Digital Library (GridIDL) for Medical Imaging,” submitted to High Performance Computing and Applications (HPCA2004), Shanghai, China, August 8-10, 2004, , accepted and being published in Lecture Note in Computer Science (LNCS), Springer-Verlag Heidelberg, Germany, 2004
• T. He, J. Ni, S. Wang, and B. Knosp, "Java Grid Computing Library --- A Distributed Programming Solution for Grid Computing," 2nd International Workshop of Grid and Cooperative Computing (GCC2003), Shanghai, China, 2003, LNCS, Springer, 2004 (in press, LNCS, Springer 2004)
• J. Ni, T. He, L. Huang, S. Wang, B. Knosp, and C Lin, "Distributed Computation for Diffusion Problem in a P2P-Enhanced Computing System," 2nd International Workshop of Grid and Cooperative Computing (GCC2003), Shanghai, China, 2003 (in press, LNCS, Springer 2004)
• Armstrong, M. P., Cowles, M. K. , and Wang , S. 2004. “ Using a C omputational Grid for Geographic Information A nalysis: A Reconnaissance. ” The Professional Geographer , forthcoming
• Ni , J., He, T., Li, X., Wang , S., and Wang, G. 2004.“Internet-based Distributed Computing System for EM Medical Image Reconstruction,” the third International Grid and Cooperative Computing (GCC2004), Wuhan, China, Oct. 21-24, Lecture Note in Computer Science (LNCS), Vol. 3251, pp 495-501, Springer-Verlag Heidelberg, Germany, 2004
• White, V., Bauerdick, L., Pordes, R., ..., Onel, O., Wang, S. et al. 2004. “The Open Science Grid (OSG).” The 2004 Conference for Computing in High Energy and Nuclear Physics (CHEP) , 27 September – 1 October, 2004, Interlaken , Switzerland
• Ni , J., Lin, C-L, Zhang, Y., He, T., Wang, S., and Knosp, B. M. 2004. “ Parallelism of Lattice Boltzmann Method (LBM) for Lid-driven Cavity Flows.” Proceedings of High Performance Computing and Applications (HPCA2004) , August 8-10, 2004, Shanghai , P. R. China,  accepted and being published in Lecture Note in Computer Science (LNCS), Springer-Verlag Heidelberg, Germany, 2004
• Li, X., He, T., Wang , S., Wang, G., and Ni , J. 2004. “P2P-enhanced Distributed Computing in Medical Image EM Reconstruction.” In: Proceedings of the 2004 International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA'04) , June 21-24, 2004, Las Vegas , Nevada , USA , Volume 2, pp. 822-828, Hamid R. Arabnia and Jun Ni (Eds.), pp. 822-828, Vol. II, ISBN: 1-932415-24-6, CSREA Press, 2004.
• Ni , J., He, T., Huang, L., Wang , S., Knosp, B. M., and Lin, C-L. 2004. “ Distributed Computation for iffusion Problem in a P2P- E nhanced C omputing S ystem .” In: Proceedings of Lecture Notes in Computer Science , Volume 3032, pp. 428-435
• Ni , J., Lin, C-L, Zhang, Y., He, T., Wang, S., and Knosp, B. M. 2004. “Performance Evaluation of a Parallel Lattice Boltzmann Method for Cavity Flows Using Cluster Computing.” In: Proceedings of the 2004 International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA'04) , June 21-24, 2004, Las Vegas , Nevada , USA , Volume 2, pp. 10-16. Hamid R. Arabnia (Ed.), pp. 10-16, Vol. I, ISBN: 1-932415-23-8, CSREA Press, 2004
• Wang , S., Padmanabhan, A. , Liu, Y., Briggs, R. , Ni, J. , Knosp, B. M. , and Onel , Y. 2004 . “ A Multi-agent S ystem F ramework for E nd-user L evel Grid M onitoring U sing G eographical I nformation Sys tems (MAGGIS): A rchitecture and I mplemen t ation. ” In: Proceedings of Lecture Notes in Computer Science , Volume 3032, pp. 536-543

   

2003 and earlier

• Wang, S., M. K. Cowles, and M. P. Armstrong. 2003. "Grid Computing of Gi*(d)." International Journal of Geographical Information Science, In preparation for submission.
• Armstrong, M. P., M. K. Cowles, and S. Wang. 2003. "Using a Computational Grid for Geographic Information Analysis: a Reconnaissance." Professional Geographers, Submitted.
• Wang, S. 2003. "Grid-based Geo-Middleware." One of Five Finalist Papers of Annual Paper Competition of Geographic Information Science Specialty Group.
• Wang, S., and M. P. Armstrong. 2003. "A Quadtree Approach to Domain Decomposition for Spatial Interpolation in Grid Computing Environments." Parallel Computing, 29 (10): 1481-1504.
• Coffman BL, Kearney WR, Goldsmith S, Knosp BM, Tephly TR. Opioids Bind to the Amino Acids 84 to 118 of UDP-Glucuronosyltransferase UGT2B7. Mol Pharmacol. 2003 Feb;63(2):283-8.
• Boddicker JD, Knosp B, Jones BD. "Transcription of the Salmonella Invasion Gene Activator, hilA, Requires Hi1D Activation in the Absence of Negative Regulators". Journal of Bacteriology, Jan 2003.
• Wang, S., M. P. Armstrong, and D. A. Bennett. 2002. "Conceptual Basics of Middleware Design to Support Grid Computing of Geographic Information." In: Proceedings of 2nd International Conference on Geographic Information Science, September, 25 - 28, Boulder, CO, USA.
• Wang, S., D. A. Bennett, and M. P. Armstrong. 2002. "Using Grid-enabled Teleimmersive Spatial Decision Support Systems (TIDSS) to Visualize Uncertainty for Water Quality Protection in Agroecosystems." In: Proceedings of the 10th International Geoinformatics Conference for Global Change Studies and Sustainable Development, 1 - 3, June, 2002, Nanjing University, Nanjing, P.R. China.
• Lili Huang, Ge Wang, S. Kao, and Jun Ni, "VoluMeasureTM: A Portable Java program for Stereological Volume Measurement, " Education Exhibition, Radiological Society of North American Scientific Assembly and Annual Meeting, Chicago, Dec. 1-6. 2002
• Lili Huang, Ge Wang, S. Kao, and Jun Ni, "VoluMeasureTM: A Portable Java program for Stereological Volume Measurement," Radiology, November 2002, Vol. 225 (P)
• Ilinsky I, Knosp B, Kultas-Ilinsky K. Stereotactic atlas of the macaca mulatta thalamus and adjacent basal ganglia nuclei: Sagittal cytoarchitectonic plates with maps of the outlined nuclei and their computer reconstructions in the coronal and horizontal planes within the intracerebral. Kluwer Academic Publishers, 2002.
• Wang, S., and M. P. Armstrong. 2002. “A Quadtree Approach to Domain Decomposition for Spatial Interpolation in Grid Computing Environments.” Parallel Computing, Forthcoming.
• Wang, S., M. P. Armstrong and D. A. Bennett. 2002. “Conceptual Basics of Middleware Design to Support Grid Computing of Geographic Information.” In: Proceedings of the 2nd International Conference on Geographic Information Science, September, 25 - 28, Boulder, CO, USA.
• Wang, S., D. A. Bennett and M. P. Armstrong. 2002. “Using Grid-enabled Teleimmersive Spatial Decision Support Systems (TIDSS) to Visualize Uncertainty for Water Quality Protection in Agroecosystems.” In: Proceedings of the International Geoinformatics 2002 Conference for Global Change Studies and Sustainable Development, 1 - 3, June, 2002, Nanjing University, Nanjing, P.R. China.
• Knosp, B. M., S. Wang, and J. Ni. 2002. “Grid-based Volume Rendering.” In: Proceedings of the International Conference of Supercomputing 2002, 16-22, November, 2002, Baltimore, MD, USA.
• Jun Ni and Lili Huang, "Hybrid High Performance Networking and High Performance Computing with Java Client/Server Enhanced Technology," Supercomputing Conference 2001 (SC2001), IEEE/Computer Society, Denver, Colorado, Nov. 2001

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